DNAstackSearch Workflows
Whole Genome Variant Calling
Call small and structural variants using Oxford Nanopore data.
alignment long-read mtDNA structural variants variants
Sentieon Somatic Variant Calling
Compare tumor/normal samples and call somatic variants using Sentieon.
alignment normal tumor variants
Sentieon Germline Whole Genome Sequencing Analysis
Align reads to the reference genome, call variants, and calculate quality metrics using Sentieon.
alignment germline variants wgs
Sentieon Long Read Germline Whole Genome Sequencing Analysis
Perform alignment and variant calling for SNPs, small indels, and structural variants using Sentieon.
alignment fastq long-read sentieon variants wgs
DRAGEN - Variant Calling and Filtering
DRAGEN functional equivalence discovery and filtering of SNPs and indels.
dragen filtering variants
